IL_7OW7_198
3D structure
- PDB id
- 7OW7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- EIF6-bound large subunit of the human ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.2 Å
Loop
- Sequence
- UGUAU(OMG)*CGAAG
- Length
- 11 nucleotides
- Bulged bases
- 7OW7|1|A|U|4634, 7OW7|1|A|U|4636
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7OW7_198 not in the Motif Atlas
- Homologous match to IL_8C3A_127
- Geometric discrepancy: 0.267
- The information below is about IL_8C3A_127
- Detailed Annotation
- UAA/GAN related
- Broad Annotation
- UAA/GAN related
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
7OW7|1|A|U|4632
7OW7|1|A|G|4633
7OW7|1|A|U|4634
7OW7|1|A|A|4635
7OW7|1|A|U|4636
7OW7|1|A|OMG|4637
*
7OW7|1|A|C|4662
7OW7|1|A|G|4663
7OW7|1|A|A|4664
7OW7|1|A|A|4665
7OW7|1|A|G|4666
Current chains
- Chain A
- 28S rRNA
Nearby chains
- Chain E
- 60S ribosomal protein L3 isoform a
- Chain X
- 60S ribosomal protein L31
- Chain u
- 60S ribosomal protein L24
Coloring options: