IL_7P7R_169

3D structure

PDB id

7P7R (explore in PDB, NAKB, or RNA 3D Hub)

Description

PoxtA-EQ2 antibiotic resistance ABCF bound to E. faecalis 70S ribosome, state I

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCG*CAAAUC

Length

10 nucleotides

Bulged bases

7P7R|1|a|C|1283, 7P7R|1|a|A|1306, 7P7R|1|a|U|1307

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7P7R_169 not in the Motif Atlas

Homologous match to IL_5J7L_055

Geometric discrepancy: 0.1117

The information below is about IL_5J7L_055

Detailed Annotation

180 degree turn

Broad Annotation

No text annotation

Motif group

IL_11344.2

Basepair signature

cWW-cSS-L-cWW

Number of instances in this motif group

2

Unit IDs

7P7R|1|a|G|1281
7P7R|1|a|U|1282
7P7R|1|a|C|1283
7P7R|1|a|G|1284
*
7P7R|1|a|C|1303
7P7R|1|a|A|1304
7P7R|1|a|A|1305
7P7R|1|a|A|1306
7P7R|1|a|U|1307
7P7R|1|a|C|1308

Current chains

Chain a

16S rRNA

Nearby chains

Chain d

30S ribosomal protein S3

Chain k

30S ribosomal protein S10

Chain o

30S ribosomal protein S14 type Z