IL_7PHC_239
3D structure
- PDB id
- 7PHC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in chloramphenicol-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 9.9 Å
Loop
- Sequence
- UUAAAGGC*GUAUG
- Length
- 13 nucleotides
- Bulged bases
- 7PHC|1|5|U|629
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PHC_239 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.4936
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7PHC|1|5|U|603
7PHC|1|5|U|604
7PHC|1|5|A|605
7PHC|1|5|A|606
7PHC|1|5|A|607
7PHC|1|5|G|608
7PHC|1|5|G|609
7PHC|1|5|C|610
*
7PHC|1|5|G|626
7PHC|1|5|U|627
7PHC|1|5|A|628
7PHC|1|5|U|629
7PHC|1|5|G|630
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S4
- Chain G
- 30S ribosomal protein S8
- Chain O
- 30S ribosomal protein S16
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