IL_7PIA_039

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

GUUG*CAUC

Length

8 nucleotides

Bulged bases

7PIA|1|3|U|1096

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIA_039 not in the Motif Atlas

Homologous match to IL_6PRV_001

Geometric discrepancy: 0.4548

The information below is about IL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7PIA|1|3|G|1094
7PIA|1|3|U|1095
7PIA|1|3|U|1096
7PIA|1|3|G|1097
*
7PIA|1|3|C|1111
7PIA|1|3|A|1112
7PIA|1|3|U|1113
7PIA|1|3|C|1114

Current chains

Chain 3

23S ribosomal RNA

Nearby chains

Chain g

50S ribosomal protein L10

Chain h

50S ribosomal protein L11