IL_7PIA_103
3D structure
- PDB id
- 7PIA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.6 Å
Loop
- Sequence
- UGCUC*GGUAG
- Length
- 10 nucleotides
- Bulged bases
- 7PIA|1|3|C|2697, 7PIA|1|3|U|2698
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIA_103 not in the Motif Atlas
- Geometric match to IL_5J7L_348
- Geometric discrepancy: 0.3798
- The information below is about IL_5J7L_348
- Detailed Annotation
- UAA/GAN related, with intercalation
- Broad Annotation
- UAA/GAN related, with intercalation
- Motif group
- IL_23774.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 11
Unit IDs
7PIA|1|3|U|2695
7PIA|1|3|G|2696
7PIA|1|3|C|2697
7PIA|1|3|U|2698
7PIA|1|3|C|2699
*
7PIA|1|3|G|2726
7PIA|1|3|G|2727
7PIA|1|3|U|2728
7PIA|1|3|A|2729
7PIA|1|3|G|2730
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L14
- Chain m
- 50S ribosomal protein L17
- Chain o
- 50S ribosomal protein L19
Coloring options: