IL_7PIA_151

3D structure

PDB id

7PIA (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome with A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells

Experimental method

ELECTRON MICROSCOPY

Resolution

13.6 Å

Loop

Sequence

UUC*GA

Length

5 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PIA_151 not in the Motif Atlas

Geometric match to IL_4V83_236

Geometric discrepancy: 0.3049

The information below is about IL_4V83_236

Detailed Annotation

Single stack bend

Broad Annotation

No text annotation

Motif group

IL_90176.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

8

Unit IDs

7PIA|1|5|U|889
7PIA|1|5|U|890
7PIA|1|5|C|891
*
7PIA|1|5|G|896
7PIA|1|5|A|897

Current chains

Chain 5

16S ribosomal RNA

Nearby chains