IL_7PIB_005
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- GGUAG*CUCAGAUC
- Length
- 13 nucleotides
- Bulged bases
- 7PIB|1|3|A|102
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_005 not in the Motif Atlas
- Geometric match to IL_5J7L_035
- Geometric discrepancy: 0.256
- The information below is about IL_5J7L_035
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_01488.3
- Basepair signature
- cWW-tSS-tSH-L-R-tHS-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7PIB|1|3|G|83
7PIB|1|3|G|84
7PIB|1|3|U|85
7PIB|1|3|A|86
7PIB|1|3|G|87
*
7PIB|1|3|C|99
7PIB|1|3|U|100
7PIB|1|3|C|101
7PIB|1|3|A|102
7PIB|1|3|G|103
7PIB|1|3|A|104
7PIB|1|3|U|105
7PIB|1|3|C|106
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain t
- 50S ribosomal protein L24
- Chain w
- 50S ribosomal protein L29
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