IL_7PIB_041
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- AGUUGAAG*UGGAU
- Length
- 13 nucleotides
- Bulged bases
- 7PIB|1|3|U|1241
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_041 not in the Motif Atlas
- Geometric match to IL_3U4M_004
- Geometric discrepancy: 0.2439
- The information below is about IL_3U4M_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 30
Unit IDs
7PIB|1|3|A|1238
7PIB|1|3|G|1239
7PIB|1|3|U|1240
7PIB|1|3|U|1241
7PIB|1|3|G|1242
7PIB|1|3|A|1243
7PIB|1|3|A|1244
7PIB|1|3|G|1245
*
7PIB|1|3|U|1264
7PIB|1|3|G|1265
7PIB|1|3|G|1266
7PIB|1|3|A|1267
7PIB|1|3|U|1268
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain p
- 50S ribosomal protein L20
- Chain r
- 50S ribosomal protein L22
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