IL_7PIB_120
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UAUCAG*CAAUGACG
- Length
- 14 nucleotides
- Bulged bases
- 7PIB|1|5|U|240, 7PIB|1|5|U|276
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_120 not in the Motif Atlas
- Geometric match to IL_4V88_402
- Geometric discrepancy: 0.2739
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
7PIB|1|5|U|238
7PIB|1|5|A|239
7PIB|1|5|U|240
7PIB|1|5|C|241
7PIB|1|5|A|242
7PIB|1|5|G|243
*
7PIB|1|5|C|273
7PIB|1|5|A|274
7PIB|1|5|A|275
7PIB|1|5|U|276
7PIB|1|5|G|277
7PIB|1|5|A|278
7PIB|1|5|C|279
7PIB|1|5|G|280
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain K
- 30S ribosomal protein S12
- Chain P
- 30S ribosomal protein S17
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