IL_7PIB_142
3D structure
- PDB id
- 7PIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with EF-G, A/P- and P/E-site tRNAs in spectinomycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.7 Å
Loop
- Sequence
- UGGAG*CGUAGAUA
- Length
- 13 nucleotides
- Bulged bases
- 7PIB|1|5|A|699
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIB_142 not in the Motif Atlas
- Geometric match to IL_7A0S_004
- Geometric discrepancy: 0.2743
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7PIB|1|5|U|681
7PIB|1|5|G|682
7PIB|1|5|G|683
7PIB|1|5|A|684
7PIB|1|5|G|685
*
7PIB|1|5|C|696
7PIB|1|5|G|697
7PIB|1|5|U|698
7PIB|1|5|A|699
7PIB|1|5|G|700
7PIB|1|5|A|701
7PIB|1|5|U|702
7PIB|1|5|A|703
Current chains
- Chain 5
- 16S ribosomal RNA
Nearby chains
- Chain 3
- Large subunit ribosomal RNA; LSU rRNA
- Chain J
- 30S ribosomal protein S11
- Chain a
- 50S ribosomal protein L2
Coloring options: