IL_7PIR_102
3D structure
- PDB id
- 7PIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome with A*- and P/E-site tRNAs in pseudouridimycin-treated Mycoplasma pneumoniae cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 12.1 Å
Loop
- Sequence
- CCUCUU*AACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PIR_102 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.3918
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7PIR|1|3|C|2688
7PIR|1|3|C|2689
7PIR|1|3|U|2690
7PIR|1|3|C|2691
7PIR|1|3|U|2692
7PIR|1|3|U|2693
*
7PIR|1|3|A|2732
7PIR|1|3|A|2733
7PIR|1|3|C|2734
7PIR|1|3|G|2735
Current chains
- Chain 3
- 23S ribosomal RNA
Nearby chains
- Chain b
- 50S ribosomal protein L3
- Chain j
- 50S ribosomal protein L14
- Chain o
- 50S ribosomal protein L19
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