IL_7PJZ_143
3D structure
- PDB id
- 7PJZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 2 (CHI2-EF-G-GDP)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6 Å
Loop
- Sequence
- UGUAG*CGUAGAGA
- Length
- 13 nucleotides
- Bulged bases
- 7PJZ|1|a|A|702
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PJZ_143 not in the Motif Atlas
- Geometric match to IL_7A0S_004
- Geometric discrepancy: 0.3065
- The information below is about IL_7A0S_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_94910.1
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7PJZ|1|a|U|684
7PJZ|1|a|G|685
7PJZ|1|a|U|686
7PJZ|1|a|A|687
7PJZ|1|a|G|688
*
7PJZ|1|a|C|699
7PJZ|1|a|G|700
7PJZ|1|a|U|701
7PJZ|1|a|A|702
7PJZ|1|a|G|703
7PJZ|1|a|A|704
7PJZ|1|a|G|705
7PJZ|1|a|A|706
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
Coloring options: