IL_7PWO_030
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- UGCGCCGC*GA
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_030 not in the Motif Atlas
- Homologous match to IL_8C3A_052
- Geometric discrepancy: 0.2697
- The information below is about IL_8C3A_052
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_84902.1
- Basepair signature
- cWW-L-cWW-L-L-R-cHH
- Number of instances in this motif group
- 2
Unit IDs
7PWO|1|1|U|882
7PWO|1|1|G|883
7PWO|1|1|C|884
7PWO|1|1|G|885
7PWO|1|1|C|886
7PWO|1|1|C|887
7PWO|1|1|G|888
7PWO|1|1|C|889
*
7PWO|1|1|G|1024
7PWO|1|1|A|1025
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain F2
- Ribosomal protein L7
- Chain O2
- Ribosomal protein L13a
- Chain S2
- 60S ribosomal protein L18a
- Chain f2
- Ribosomal protein L35a
Coloring options: