IL_7PWO_037
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GCAGUAG*CGAGCC
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_037 not in the Motif Atlas
- Homologous match to IL_5TBW_061
- Geometric discrepancy: 0.1289
- The information below is about IL_5TBW_061
- Detailed Annotation
- 7x6 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_76042.3
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
7PWO|1|1|G|1131
7PWO|1|1|C|1132
7PWO|1|1|A|1133
7PWO|1|1|G|1134
7PWO|1|1|U|1135
7PWO|1|1|A|1136
7PWO|1|1|G|1137
*
7PWO|1|1|C|1841
7PWO|1|1|G|1842
7PWO|1|1|A|1843
7PWO|1|1|G|1844
7PWO|1|1|C|1845
7PWO|1|1|C|1846
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain 42
- rRNA 5.8S
- Chain C2
- Ribosomal protein L4
- Chain P2
- Ribosomal protein L17
Coloring options: