IL_7PWO_046
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGGACG*CGGAGAGG
- Length
- 14 nucleotides
- Bulged bases
- 7PWO|1|1|C|1381, 7PWO|1|1|A|1393
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_046 not in the Motif Atlas
- Geometric match to IL_3U4M_004
- Geometric discrepancy: 0.3032
- The information below is about IL_3U4M_004
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90775.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 30
Unit IDs
7PWO|1|1|C|1377
7PWO|1|1|G|1378
7PWO|1|1|G|1379
7PWO|1|1|A|1380
7PWO|1|1|C|1381
7PWO|1|1|G|1382
*
7PWO|1|1|C|1390
7PWO|1|1|G|1391
7PWO|1|1|G|1392
7PWO|1|1|A|1393
7PWO|1|1|G|1394
7PWO|1|1|A|1395
7PWO|1|1|G|1396
7PWO|1|1|G|1397
Current chains
- Chain 1
- rRNA 28S
Nearby chains
- Chain N1
- Ribosomal protein S13
- Chain R2
- Ribosomal protein L19
- Chain Z2
- 60S ribosomal protein L27
- Chain c2
- Ribosomal protein L30
- Chain p2
- Ribosomal protein L37a
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