IL_7PWO_127
3D structure
- PDB id
- 7PWO (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 7PWO|1|2|G|628
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7PWO_127 not in the Motif Atlas
- Homologous match to IL_4V88_431
- Geometric discrepancy: 0.0984
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7PWO|1|2|C|626
7PWO|1|2|G|627
7PWO|1|2|G|628
7PWO|1|2|G|629
7PWO|1|2|G|630
*
7PWO|1|2|C|702
7PWO|1|2|A|703
7PWO|1|2|A|704
7PWO|1|2|G|705
Current chains
- Chain 2
- rRNA 18S
Nearby chains
- Chain B1
- 40S ribosomal protein S3a
- Chain N1
- Ribosomal protein S13
- Chain a1
- 40S ribosomal protein S26
- Chain c2
- Ribosomal protein L30
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