IL_7PWO_145

3D structure

PDB id

7PWO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of Giardia lamblia ribosome at 2.75 A resolution

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

G(OMG)U*GCC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7PWO_145 not in the Motif Atlas

Geometric match to IL_1N33_070

Geometric discrepancy: 0.2031

The information below is about IL_1N33_070

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.3

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

269

Unit IDs

7PWO|1|2|G|1010
7PWO|1|2|OMG|1011
7PWO|1|2|U|1012
*
7PWO|1|2|G|1142
7PWO|1|2|C|1143
7PWO|1|2|C|1144

Current chains

Chain 2

rRNA 18S

Nearby chains

Chain D1

Ribosomal protein S3