IL_7Q08_202
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- UUGUU*GACG
- Length
- 9 nucleotides
- Bulged bases
- 7Q08|1|A|G|1038
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q08_202 not in the Motif Atlas
- Geometric match to IL_5EW4_002
- Geometric discrepancy: 0.3551
- The information below is about IL_5EW4_002
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_85033.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 35
Unit IDs
7Q08|1|A|U|1036
7Q08|1|A|U|1037
7Q08|1|A|G|1038
7Q08|1|A|U|1039
7Q08|1|A|U|1040
*
7Q08|1|A|G|1049
7Q08|1|A|A|1050
7Q08|1|A|C|1051
7Q08|1|A|G|1052
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain B
- 40S ribosomal protein S0
- Chain C
- 40S ribosomal protein S1
- Chain S
- Ribosomal 40S subunit protein S17B
- Chain c
- 40S ribosomal protein S27
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