IL_7Q08_206
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 7Q08|1|A|C|1143, 7Q08|1|A|C|1144
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q08_206 not in the Motif Atlas
- Geometric match to IL_4V88_443
- Geometric discrepancy: 0.1551
- The information below is about IL_4V88_443
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.9
- Basepair signature
- cWW-cWS-cHS-L-cWW-tWH
- Number of instances in this motif group
- 15
Unit IDs
7Q08|1|A|A|1142
7Q08|1|A|C|1143
7Q08|1|A|C|1144
7Q08|1|A|A|1145
*
7Q08|1|A|U|1604
7Q08|1|A|C|1605
7Q08|1|A|C|1606
7Q08|1|A|C|1607
7Q08|1|A|U|1608
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain G
- Ribosomal 40S subunit protein S5
- Chain R
- Ribosomal 40S subunit protein S16A
- Chain b
- 40S ribosomal protein S26
- Chain d
- Ribosomal 40S subunit protein S28B
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