IL_7Q08_221
3D structure
- PDB id
- 7Q08 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Candida albicans 80S ribosome in complex with cycloheximide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.56 Å
Loop
- Sequence
- GUAUAAGC*GAAAUC
- Length
- 14 nucleotides
- Bulged bases
- 7Q08|1|A|A|1503
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7Q08_221 not in the Motif Atlas
- Homologous match to IL_8C3A_467
- Geometric discrepancy: 0.2027
- The information below is about IL_8C3A_467
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_37172.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7Q08|1|A|G|1474
7Q08|1|A|U|1475
7Q08|1|A|A|1476
7Q08|1|A|U|1477
7Q08|1|A|A|1478
7Q08|1|A|A|1479
7Q08|1|A|G|1480
7Q08|1|A|C|1481
*
7Q08|1|A|G|1500
7Q08|1|A|A|1501
7Q08|1|A|A|1502
7Q08|1|A|A|1503
7Q08|1|A|U|1504
7Q08|1|A|C|1505
Current chains
- Chain A
- 18S ribosomal RNA
Nearby chains
- Chain E
- Ribosomal 40S subunit protein S3
- Chain V
- Ribosomal 40S subunit protein S20
- Chain e
- Ribosomal 40S subunit protein S29A
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