IL_7QCA_031
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- 7QCA|1|L50|U|1023
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QCA_031 not in the Motif Atlas
- Homologous match to IL_5TBW_048
- Geometric discrepancy: 0.1879
- The information below is about IL_5TBW_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7QCA|1|L50|C|866
7QCA|1|L50|U|867
7QCA|1|L50|A|868
7QCA|1|L50|A|869
7QCA|1|L50|G|870
*
7QCA|1|L50|C|1020
7QCA|1|L50|G|1021
7QCA|1|L50|A|1022
7QCA|1|L50|U|1023
7QCA|1|L50|G|1024
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain L70
- 5S ribosomal RNA; 5S rRNA
- Chain LEE
- 60S ribosomal protein L32
- Chain LF0
- 60S ribosomal protein L7
- Chain LFF
- 60S ribosomal protein L35a
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