IL_7QCA_041
3D structure
- PDB id
- 7QCA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Spraguea lophii ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.78 Å
Loop
- Sequence
- CUAAG*CGAAGG
- Length
- 11 nucleotides
- Bulged bases
- 7QCA|1|L50|A|1218, 7QCA|1|L50|G|1219
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QCA_041 not in the Motif Atlas
- Homologous match to IL_5TBW_063
- Geometric discrepancy: 0.0917
- The information below is about IL_5TBW_063
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7QCA|1|L50|C|1190
7QCA|1|L50|U|1191
7QCA|1|L50|A|1192
7QCA|1|L50|A|1193
7QCA|1|L50|G|1194
*
7QCA|1|L50|C|1215
7QCA|1|L50|G|1216
7QCA|1|L50|A|1217
7QCA|1|L50|A|1218
7QCA|1|L50|G|1219
7QCA|1|L50|G|1220
Current chains
- Chain L50
- RNA 23S
Nearby chains
- Chain LA0
- 60S ribosomal protein L8
- Chain LGG
- Ribosomal protein L34
- Chain LJJ
- eL37 LJJ
- Chain LLL
- 60S ribosomal protein L39
- Chain LX0
- 60S ribosomal protein L23a
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