IL_7QGH_030

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

UGAAAUCC*GAACUG

Length

14 nucleotides

Bulged bases

7QGH|1|0|U|632

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGH_030 not in the Motif Atlas

Homologous match to IL_5J7L_030

Geometric discrepancy: 0.0951

The information below is about IL_5J7L_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78349.3

Basepair signature

cWW-L-R-L-R-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7QGH|1|0|U|605
7QGH|1|0|G|606
7QGH|1|0|A|607
7QGH|1|0|A|608
7QGH|1|0|A|609
7QGH|1|0|U|610
7QGH|1|0|C|611
7QGH|1|0|C|612
*
7QGH|1|0|G|628
7QGH|1|0|A|629
7QGH|1|0|A|630
7QGH|1|0|C|631
7QGH|1|0|U|632
7QGH|1|0|G|633

Current chains

Chain 0

16S rRNA

Nearby chains

Chain 3

30S ribosomal protein S4

Chain 7

30S ribosomal protein S8

Chain G

30S ribosomal protein S16

Chain H

30S ribosomal protein S17