IL_7QGH_035

3D structure

PDB id

7QGH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the E. coli disome - collided 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.48 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

7QGH|1|0|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGH_035 not in the Motif Atlas

Homologous match to IL_5J7L_035

Geometric discrepancy: 0.0963

The information below is about IL_5J7L_035

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_01488.3

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

10

Unit IDs

7QGH|1|0|U|684
7QGH|1|0|G|685
7QGH|1|0|U|686
7QGH|1|0|A|687
7QGH|1|0|G|688
*
7QGH|1|0|C|699
7QGH|1|0|G|700
7QGH|1|0|U|701
7QGH|1|0|A|702
7QGH|1|0|G|703
7QGH|1|0|A|704
7QGH|1|0|G|705
7QGH|1|0|A|706

Current chains

Chain 0

16S rRNA

Nearby chains

Chain A

30S ribosomal protein S11

Chain N

Large subunit ribosomal RNA; LSU rRNA