3D structure

PDB id
7QGH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the E. coli disome - collided 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.48 Å

Loop

Sequence
UCACU*AAA
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QGH_165 not in the Motif Atlas
Homologous match to IL_5J7L_347
Geometric discrepancy: 0.0762
The information below is about IL_5J7L_347
Detailed Annotation
C-loop
Broad Annotation
No text annotation
Motif group
IL_63596.11
Basepair signature
cWW-cWS-cSH-tWH-cWW-L
Number of instances in this motif group
19

Unit IDs

7QGH|1|N|U|2680
7QGH|1|N|C|2681
7QGH|1|N|A|2682
7QGH|1|N|C|2683
7QGH|1|N|U|2684
*
7QGH|1|N|A|2725
7QGH|1|N|A|2726
7QGH|1|N|A|2727

Current chains

Chain N
23S rRNA

Nearby chains

Chain Q
50S ribosomal protein L3
Chain X
50S ribosomal protein L14
Chain a
50S ribosomal protein L17
Chain c
50S ribosomal protein L19

Coloring options:


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