IL_7QGR_034
3D structure
- PDB id
- 7QGR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the SmrB-bound E. coli disome - collided 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.7 Å
Loop
- Sequence
- AGAAUU*AGGAAU
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QGR_034 not in the Motif Atlas
- Geometric match to IL_5J7L_034
- Geometric discrepancy: 0.0839
- The information below is about IL_5J7L_034
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_04668.2
- Basepair signature
- cWW-cWW-cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 8
Unit IDs
7QGR|1|0|A|673
7QGR|1|0|G|674
7QGR|1|0|A|675
7QGR|1|0|A|676
7QGR|1|0|U|677
7QGR|1|0|U|678
*
7QGR|1|0|A|712
7QGR|1|0|G|713
7QGR|1|0|G|714
7QGR|1|0|A|715
7QGR|1|0|A|716
7QGR|1|0|U|717
Current chains
- Chain 0
- 16S rRNA
Nearby chains
- Chain 5
- 30S ribosomal protein S6, non-modified isoform
- Chain A
- 30S ribosomal protein S11
- Chain I
- 30S ribosomal protein S18
- Chain P
- 50S ribosomal protein L2
- Chain s
- 30S ribosomal protein S21
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