IL_7QGU_047

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

CUGUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

7QGU|1|A|U|1251

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_047 not in the Motif Atlas

Homologous match to IL_7A0S_043

Geometric discrepancy: 0.2072

The information below is about IL_7A0S_043

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.1

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

23

Unit IDs

7QGU|1|A|C|1248
7QGU|1|A|U|1249
7QGU|1|A|G|1250
7QGU|1|A|U|1251
7QGU|1|A|G|1252
7QGU|1|A|A|1253
7QGU|1|A|A|1254
7QGU|1|A|G|1255
*
7QGU|1|A|U|1274
7QGU|1|A|G|1275
7QGU|1|A|G|1276
7QGU|1|A|A|1277
7QGU|1|A|G|1278

Current chains

Chain A

23S rRNA

Nearby chains

Chain Q

50S ribosomal protein L20