IL_7QGU_109

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UGUAC*GGUAG

Length

10 nucleotides

Bulged bases

7QGU|1|A|U|2718, 7QGU|1|A|A|2719

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_109 not in the Motif Atlas

Homologous match to IL_5J7L_348

Geometric discrepancy: 0.1336

The information below is about IL_5J7L_348

Detailed Annotation

UAA/GAN related, with intercalation

Broad Annotation

UAA/GAN related, with intercalation

Motif group

IL_23774.1

Basepair signature

cWW-L-R-L-tHS-cWW

Number of instances in this motif group

11

Unit IDs

7QGU|1|A|U|2716
7QGU|1|A|G|2717
7QGU|1|A|U|2718
7QGU|1|A|A|2719
7QGU|1|A|C|2720
*
7QGU|1|A|G|2747
7QGU|1|A|G|2748
7QGU|1|A|U|2749
7QGU|1|A|A|2750
7QGU|1|A|G|2751

Current chains

Chain A

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L3

Chain N

50S ribosomal protein L17

Chain P

50S ribosomal protein L19