3D structure

PDB id
7QGU (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the B. subtilis disome - stalled 70S ribosome
Experimental method
ELECTRON MICROSCOPY
Resolution
4.75 Å

Loop

Sequence
UGAAAGCC*GAGGG
Length
13 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7QGU_145 not in the Motif Atlas
Homologous match to IL_5J7L_030
Geometric discrepancy: 0.226
The information below is about IL_5J7L_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_78349.3
Basepair signature
cWW-L-R-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

7QGU|1|W|U|614
7QGU|1|W|G|615
7QGU|1|W|A|616
7QGU|1|W|A|617
7QGU|1|W|A|618
7QGU|1|W|G|619
7QGU|1|W|C|620
7QGU|1|W|C|621
*
7QGU|1|W|G|637
7QGU|1|W|A|638
7QGU|1|W|G|639
7QGU|1|W|G|640
7QGU|1|W|G|641

Current chains

Chain W
16S rRNA

Nearby chains

Chain i
30S ribosomal protein S4
Chain u
30S ribosomal protein S16

Coloring options:


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