IL_7QGU_150

3D structure

PDB id

7QGU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the B. subtilis disome - stalled 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

4.75 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

7QGU|1|W|A|711

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QGU_150 not in the Motif Atlas

Homologous match to IL_5J7L_035

Geometric discrepancy: 0.1429

The information below is about IL_5J7L_035

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_01488.3

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

10

Unit IDs

7QGU|1|W|U|693
7QGU|1|W|G|694
7QGU|1|W|U|695
7QGU|1|W|A|696
7QGU|1|W|G|697
*
7QGU|1|W|C|708
7QGU|1|W|G|709
7QGU|1|W|U|710
7QGU|1|W|A|711
7QGU|1|W|G|712
7QGU|1|W|A|713
7QGU|1|W|G|714
7QGU|1|W|A|715

Current chains

Chain W

16S rRNA

Nearby chains

Chain A

Large subunit ribosomal RNA; LSU rRNA

Chain p

30S ribosomal protein S11