IL_7QIW_039
3D structure
- PDB id
- 7QIW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant ribosome. 60S ribosomal subunit.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.35 Å
Loop
- Sequence
- G(OMG)G*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 7QIW|1|2|A|930, 7QIW|1|2|A|931
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIW_039 not in the Motif Atlas
- Geometric match to IL_5TBW_033
- Geometric discrepancy: 0.0956
- The information below is about IL_5TBW_033
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
7QIW|1|2|G|917
7QIW|1|2|OMG|918
7QIW|1|2|G|919
*
7QIW|1|2|U|929
7QIW|1|2|A|930
7QIW|1|2|A|931
7QIW|1|2|U|932
7QIW|1|2|C|933
Current chains
- Chain 2
- 25S rRNA
Nearby chains
- Chain D
- 60S ribosomal protein L8
- Chain P
- Ribosomal protein L15
- Chain R
- 50S ribosomal protein L22, chloroplastic
- Chain l
- Ribosomal protein L37
Coloring options: