IL_7QIZ_212
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CGGGG*CAAG
- Length
- 9 nucleotides
- Bulged bases
- 7QIZ|1|S2|G|879
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_212 not in the Motif Atlas
- Geometric match to IL_4V88_431
- Geometric discrepancy: 0.0899
- The information below is about IL_4V88_431
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_67085.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 55
Unit IDs
7QIZ|1|S2|C|877
7QIZ|1|S2|G|878
7QIZ|1|S2|G|879
7QIZ|1|S2|G|880
7QIZ|1|S2|G|881
*
7QIZ|1|S2|C|953
7QIZ|1|S2|A|954
7QIZ|1|S2|A|955
7QIZ|1|S2|G|956
Current chains
- Chain S2
- 18S
Nearby chains
- Chain DA
- 40S ribosomal protein S26
- Chain HA
- 30S ribosomal protein S15, chloroplastic
- Chain e
- 60S ribosomal protein eL30
- Chain v
- 40S ribosomal protein S3a
Coloring options: