IL_7QIZ_216
3D structure
- PDB id
- 7QIZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Specific features and methylation sites of a plant 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.38 Å
Loop
- Sequence
- CGAAG*CCUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QIZ_216 not in the Motif Atlas
- Geometric match to IL_4V88_436
- Geometric discrepancy: 0.0997
- The information below is about IL_4V88_436
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.4
- Basepair signature
- cWW-R-L-tHS-tHW-cWW
- Number of instances in this motif group
- 18
Unit IDs
7QIZ|1|S2|C|993
7QIZ|1|S2|G|994
7QIZ|1|S2|A|995
7QIZ|1|S2|A|996
7QIZ|1|S2|G|997
*
7QIZ|1|S2|C|1013
7QIZ|1|S2|C|1014
7QIZ|1|S2|U|1015
7QIZ|1|S2|A|1016
7QIZ|1|S2|G|1017
Current chains
- Chain S2
- 18S
Nearby chains
- Chain 2
- Large subunit ribosomal RNA; LSU rRNA
- Chain D
- 60S ribosomal protein L8
- Chain DA
- 40S ribosomal protein S26
- Chain IA
- Ribosomal protein S14
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