IL_7QV3_085

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CGAAAUUCCUUG*CCCG

Length

16 nucleotides

Bulged bases

7QV3|1|V|A|1967, 7QV3|1|V|U|1973, 7QV3|1|V|C|1992

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_085 not in the Motif Atlas

Geometric match to IL_4WF9_077

Geometric discrepancy: 0.3185

The information below is about IL_4WF9_077

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_84014.1

Basepair signature

cWW-L-R-cHW-cWW-L-L-tSW-L

Number of instances in this motif group

8

Unit IDs

7QV3|1|V|C|1963
7QV3|1|V|G|1964
7QV3|1|V|A|1965
7QV3|1|V|A|1966
7QV3|1|V|A|1967
7QV3|1|V|U|1968
7QV3|1|V|U|1969
7QV3|1|V|C|1970
7QV3|1|V|C|1971
7QV3|1|V|U|1972
7QV3|1|V|U|1973
7QV3|1|V|G|1974
*
7QV3|1|V|C|1990
7QV3|1|V|C|1991
7QV3|1|V|C|1992
7QV3|1|V|G|1993

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain C

50S ribosomal protein L2

Chain a

Small subunit ribosomal RNA; SSU rRNA