IL_7QV3_146

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

UGAAAGCC*GAGGG

Length

13 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_146 not in the Motif Atlas

Homologous match to IL_5J7L_030

Geometric discrepancy: 0.286

The information below is about IL_5J7L_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_78349.3

Basepair signature

cWW-L-R-L-R-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7QV3|1|a|U|614
7QV3|1|a|G|615
7QV3|1|a|A|616
7QV3|1|a|A|617
7QV3|1|a|A|618
7QV3|1|a|G|619
7QV3|1|a|C|620
7QV3|1|a|C|621
*
7QV3|1|a|G|637
7QV3|1|a|A|638
7QV3|1|a|G|639
7QV3|1|a|G|640
7QV3|1|a|G|641

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4

Chain h

30S ribosomal protein S8

Chain p

30S ribosomal protein S16