IL_7QV3_180

3D structure

PDB id

7QV3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (MutS2 conf.2; Leading 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.14 Å

Loop

Sequence

CCGAAG*CGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QV3_180 not in the Motif Atlas

Geometric match to IL_5J7L_063

Geometric discrepancy: 0.2261

The information below is about IL_5J7L_063

Detailed Annotation

Triple sheared related

Broad Annotation

Triple sheared

Motif group

IL_80231.1

Basepair signature

cWW-L-R-L-R-L-R-tHS-cWW

Number of instances in this motif group

2

Unit IDs

7QV3|1|a|C|1439
7QV3|1|a|C|1440
7QV3|1|a|G|1441
7QV3|1|a|A|1442
7QV3|1|a|A|1443
7QV3|1|a|G|1444
*
7QV3|1|a|C|1476
7QV3|1|a|G|1477
7QV3|1|a|A|1478
7QV3|1|a|A|1479
7QV3|1|a|G|1480

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19

Chain V

Large subunit ribosomal RNA; LSU rRNA

Chain t

30S ribosomal protein S20