IL_7QVP_268
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AACAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QVP_268 not in the Motif Atlas
- Homologous match to IL_8C3A_080
- Geometric discrepancy: 0.1079
- The information below is about IL_8C3A_080
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
7QVP|1|L6|A|2832
7QVP|1|L6|A|2833
7QVP|1|L6|C|2834
7QVP|1|L6|A|2835
7QVP|1|L6|A|2836
7QVP|1|L6|U|2837
7QVP|1|L6|G|2838
*
7QVP|1|L6|C|3850
7QVP|1|L6|U|3851
7QVP|1|L6|A|3852
7QVP|1|L6|U|3853
Current chains
- Chain L6
- 28S ribosomal RNA
Nearby chains
- Chain MB
- 60S ribosomal protein L3
- Chain MP
- 60S ribosomal protein L17
- Chain Md
- 60S ribosomal protein L31
Coloring options: