IL_7QVP_328
3D structure
- PDB id
- 7QVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human collided disome (di-ribosome) stalled on XBP1 mRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- GUU*GUCAGC
- Length
- 9 nucleotides
- Bulged bases
- 7QVP|1|L6|G|5049
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7QVP_328 not in the Motif Atlas
- Homologous match to IL_8C3A_138
- Geometric discrepancy: 0.1994
- The information below is about IL_8C3A_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_84428.1
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
7QVP|1|L6|G|5000
7QVP|1|L6|U|5001
7QVP|1|L6|U|5002
*
7QVP|1|L6|G|5045
7QVP|1|L6|U|5046
7QVP|1|L6|C|5047
7QVP|1|L6|A|5048
7QVP|1|L6|G|5049
7QVP|1|L6|C|5050
Current chains
- Chain L6
- 28S ribosomal RNA
Nearby chains
- Chain MB
- 60S ribosomal protein L3
- Chain MW
- 60S ribosomal protein L24
- Chain Md
- 60S ribosomal protein L31
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