IL_7QWR_152

3D structure

PDB id

7QWR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the ribosome-nascent chain containing an ER signal sequence in complex with NAC

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUU*GUCAGC

Length

9 nucleotides

Bulged bases

7QWR|1|5|G|5049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7QWR_152 not in the Motif Atlas

Geometric match to IL_5TBW_132

Geometric discrepancy: 0.2008

The information below is about IL_5TBW_132

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_84428.1

Basepair signature

cWW-cWW-L-cWW-L

Number of instances in this motif group

2

Unit IDs

7QWR|1|5|G|5000
7QWR|1|5|U|5001
7QWR|1|5|U|5002
*
7QWR|1|5|G|5045
7QWR|1|5|U|5046
7QWR|1|5|C|5047
7QWR|1|5|A|5048
7QWR|1|5|G|5049
7QWR|1|5|C|5050

Current chains

Chain 5

28S rRNA

Nearby chains

Chain B

Ribosomal protein L3

Chain d

Ribosomal protein L31