IL_7S0S_091

3D structure

PDB id

7S0S (explore in PDB, NAKB, or RNA 3D Hub)

Description

M. tuberculosis ribosomal RNA methyltransferase TlyA bound to M. smegmatis 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GA*UACC

Length

6 nucleotides

Bulged bases

7S0S|1|C|A|2663

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7S0S_091 not in the Motif Atlas

Homologous match to IL_7A0S_076

Geometric discrepancy: 0.0772

The information below is about IL_7A0S_076

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_34520.3

Basepair signature

cWW-cSH-cWW

Number of instances in this motif group

61

Unit IDs

7S0S|1|C|G|2293
7S0S|1|C|A|2294
*
7S0S|1|C|U|2662
7S0S|1|C|A|2663
7S0S|1|C|C|2664
7S0S|1|C|C|2665

Current chains

Chain C

23S rRNA

Nearby chains

Chain D

50S ribosomal protein L2