IL_7SUK_026
3D structure
- PDB id
- 7SUK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 7SUK|1|8|C|1158, 7SUK|1|8|C|1159
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SUK_026 not in the Motif Atlas
- Geometric match to IL_4V88_443
- Geometric discrepancy: 0.1915
- The information below is about IL_4V88_443
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.9
- Basepair signature
- cWW-cWS-cHS-L-cWW-tWH
- Number of instances in this motif group
- 15
Unit IDs
7SUK|1|8|A|1157
7SUK|1|8|C|1158
7SUK|1|8|C|1159
7SUK|1|8|A|1160
*
7SUK|1|8|U|1617
7SUK|1|8|C|1618
7SUK|1|8|C|1619
7SUK|1|8|C|1620
7SUK|1|8|U|1621
Current chains
- Chain 8
- 18S pre-rRNA
Nearby chains
- Chain L5
- 40S ribosomal protein S5
- Chain LC
- 40S ribosomal protein S16-A
- Chain LG
- 40S ribosomal protein S28-A
- Chain LO
- Periodic tryptophan protein 2
- Chain LQ
- U3 small nucleolar RNA-associated protein 12
- Chain SM
- U3 small nucleolar ribonucleoprotein protein IMP4
- Chain ST
- Nucleolar complex protein 14
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