IL_7SUK_028
3D structure
- PDB id
- 7SUK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Bfr2-Lcp5 Complex Observed in the Small Subunit Processome Isolated from R2TP-depleted Yeast Cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.99 Å
Loop
- Sequence
- GGUC*GUUC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7SUK_028 not in the Motif Atlas
- Homologous match to IL_9PN5_200
- Geometric discrepancy: 0.4703
- The information below is about IL_9PN5_200
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_39691.1
- Basepair signature
- cWW-L-R-L-R-cWW
- Number of instances in this motif group
- 9
Unit IDs
7SUK|1|8|G|1212
7SUK|1|8|G|1213
7SUK|1|8|U|1214
7SUK|1|8|C|1215
*
7SUK|1|8|G|1448
7SUK|1|8|U|1449
7SUK|1|8|U|1450
7SUK|1|8|C|1451
Current chains
- Chain 8
- 18S pre-rRNA
Nearby chains
- Chain NB
- Something about silencing protein 10
- Chain SJ
- Ribosomal RNA small subunit methyltransferase NEP1
- Chain ST
- Nucleolar complex protein 14
- Chain SZ
- Essential nuclear protein 1
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