IL_7TOQ_168
3D structure
- PDB id
- 7TOQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PR
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAUAGACAG*CCGAA
- Length
- 14 nucleotides
- Bulged bases
- 7TOQ|1|A25S|A|1960
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOQ_168 not in the Motif Atlas
- Homologous match to IL_8C3A_057
- Geometric discrepancy: 0.5812
- The information below is about IL_8C3A_057
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_90538.5
- Basepair signature
- cWW-tSS-tSS-tSH-L-tHS-R-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
7TOQ|1|A25S|U|1957
7TOQ|1|A25S|A|1958
7TOQ|1|A25S|U|1959
7TOQ|1|A25S|A|1960
7TOQ|1|A25S|G|1961
7TOQ|1|A25S|A|1962
7TOQ|1|A25S|C|1963
7TOQ|1|A25S|A|1964
7TOQ|1|A25S|G|1965
*
7TOQ|1|A25S|C|2022
7TOQ|1|A25S|C|2023
7TOQ|1|A25S|G|2024
7TOQ|1|A25S|A|2025
7TOQ|1|A25S|A|2026
Current chains
- Chain A25S
- 28S rRNA
Nearby chains
- Chain AL40
- eL40
- Chain ALP0
- 60S acidic ribosomal protein P0
Coloring options: