IL_7TOS_066
3D structure
- PDB id
- 7TOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGGAUG*CUGAAAC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7TOS_066 not in the Motif Atlas
- Geometric match to IL_7A0S_001
- Geometric discrepancy: 0.1294
- The information below is about IL_7A0S_001
- Detailed Annotation
- Triple sheared with non-canonical cWW
- Broad Annotation
- Triple sheared
- Motif group
- IL_22311.1
- Basepair signature
- cWW-cWW-tSH-tHS-tHS-L-R-cWW
- Number of instances in this motif group
- 10
Unit IDs
7TOS|1|23S|G|24
7TOS|1|23S|U|25
7TOS|1|23S|G|26
7TOS|1|23S|G|27
7TOS|1|23S|A|28
7TOS|1|23S|U|29
7TOS|1|23S|G|30
*
7TOS|1|23S|C|510
7TOS|1|23S|U|511
7TOS|1|23S|G|512
7TOS|1|23S|A|513
7TOS|1|23S|A|514
7TOS|1|23S|A|515
7TOS|1|23S|C|516
Current chains
- Chain 23S
- 23S ribosomal RNA
Nearby chains
- Chain L20
- 50S ribosomal protein L20
- Chain L22
- 50S ribosomal protein L22
- Chain L32
- 50S ribosomal protein L32
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