IL_7UNV_138
3D structure
- PDB id
- 7UNV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUGCCAG*CGGUAAUAC
- Length
- 16 nucleotides
- Bulged bases
- 7UNV|1|a|A|526, 7UNV|1|a|U|528, 7UNV|1|a|A|529
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UNV_138 not in the Motif Atlas
- Geometric match to IL_4V88_415
- Geometric discrepancy: 0.1164
- The information below is about IL_4V88_415
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_54177.1
- Basepair signature
- cWW-cSW-tWH-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 5
Unit IDs
7UNV|1|a|G|509
7UNV|1|a|U|510
7UNV|1|a|G|511
7UNV|1|a|C|512
7UNV|1|a|C|513
7UNV|1|a|A|514
7UNV|1|a|G|515
*
7UNV|1|a|C|522
7UNV|1|a|G|523
7UNV|1|a|G|524
7UNV|1|a|U|525
7UNV|1|a|A|526
7UNV|1|a|A|527
7UNV|1|a|U|528
7UNV|1|a|A|529
7UNV|1|a|C|530
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain d
- 30S ribosomal protein S4
- Chain l
- 30S ribosomal protein S12
Coloring options: