IL_7UPH_029
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- UGAAAUCC*GAACUG
- Length
- 14 nucleotides
- Bulged bases
- 7UPH|1|I|U|631
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_029 not in the Motif Atlas
- Homologous match to IL_5J7L_030
- Geometric discrepancy: 0.2624
- The information below is about IL_5J7L_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_78349.3
- Basepair signature
- cWW-L-R-L-R-L-R-L-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
7UPH|1|I|U|604
7UPH|1|I|G|605
7UPH|1|I|A|606
7UPH|1|I|A|607
7UPH|1|I|A|608
7UPH|1|I|U|609
7UPH|1|I|C|610
7UPH|1|I|C|611
*
7UPH|1|I|G|627
7UPH|1|I|A|628
7UPH|1|I|A|629
7UPH|1|I|C|630
7UPH|1|I|U|631
7UPH|1|I|G|632
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain C
- 30S ribosomal protein S16
- Chain Y
- 30S ribosomal protein S4
- Chain c
- 30S ribosomal protein S8
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