IL_7UPH_073
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- CCAGUAG*CGAACG
- Length
- 13 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_073 not in the Motif Atlas
- Geometric match to IL_8C3A_065
- Geometric discrepancy: 0.2809
- The information below is about IL_8C3A_065
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_76042.3
- Basepair signature
- cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 9
Unit IDs
7UPH|1|I|C|1739
7UPH|1|I|C|1740
7UPH|1|I|A|1741
7UPH|1|I|G|1742
7UPH|1|I|U|1743
7UPH|1|I|A|1744
7UPH|1|I|G|1745
*
7UPH|1|I|C|1753
7UPH|1|I|G|1754
7UPH|1|I|A|1755
7UPH|1|I|A|1756
7UPH|1|I|C|1757
7UPH|1|I|G|1758
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain T
- 50S ribosomal protein L15
- Chain l
- 50S ribosomal protein L35
Coloring options: