IL_7UPH_098
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 7UPH|1|I|A|2650
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_098 not in the Motif Atlas
- Geometric match to IL_7A0S_033
- Geometric discrepancy: 0.2
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_38507.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 16
Unit IDs
7UPH|1|I|C|2492
7UPH|1|I|U|2493
7UPH|1|I|A|2494
7UPH|1|I|A|2495
7UPH|1|I|G|2496
*
7UPH|1|I|C|2647
7UPH|1|I|G|2648
7UPH|1|I|A|2649
7UPH|1|I|A|2650
7UPH|1|I|G|2651
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain J
- 5S ribosomal RNA; 5S rRNA
- Chain p
- 50S ribosomal protein L20
- Chain q
- 50S ribosomal protein L21
- Chain y
- 50S ribosomal protein L30
Coloring options: