IL_7UPH_114
3D structure
- PDB id
- 7UPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a ribosome with tethered subunits
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.18 Å
Loop
- Sequence
- CUAAG*CGAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7UPH_114 not in the Motif Atlas
- Geometric match to IL_5TBW_048
- Geometric discrepancy: 0.3118
- The information below is about IL_5TBW_048
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
7UPH|1|I|C|2845
7UPH|1|I|U|2846
7UPH|1|I|A|2847
7UPH|1|I|A|2848
7UPH|1|I|G|2849
*
7UPH|1|I|C|2870
7UPH|1|I|G|2871
7UPH|1|I|A|2872
7UPH|1|I|U|2873
7UPH|1|I|G|2874
Current chains
- Chain I
- Tethered rRNA
Nearby chains
- Chain K
- 50S ribosomal protein L2
- Chain k
- 50S ribosomal protein L34
Coloring options: