IL_7WTU_059
3D structure
- PDB id
- 7WTU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a human pre-40S ribosomal subunit - State RRP12-A1 (without CK1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 7WTU|1|2|C|1215, 7WTU|1|2|C|1216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7WTU_059 not in the Motif Atlas
- Geometric match to IL_4V88_443
- Geometric discrepancy: 0.1179
- The information below is about IL_4V88_443
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.9
- Basepair signature
- cWW-cWS-cHS-L-cWW-tWH
- Number of instances in this motif group
- 15
Unit IDs
7WTU|1|2|A|1214
7WTU|1|2|C|1215
7WTU|1|2|C|1216
7WTU|1|2|A|1217
*
7WTU|1|2|U|1681
7WTU|1|2|C|1682
7WTU|1|2|C|1683
7WTU|1|2|C|1684
7WTU|1|2|U|1685
Current chains
- Chain 2
- 18S rRNA
Nearby chains
- Chain F
- 40S ribosomal protein S5
- Chain K
- RRP12-like protein
- Chain c
- 40S ribosomal protein S28
- Chain q
- Probable 18S rRNA (guanine-N(7))-methyltransferase
- Chain w
- Bystin
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